ProteoRed - Instituto Nacional de Protemica Jul 30th, 2010 
ProteoRed Multi-centric Experiment 6 page

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Related Links
HUPO
www.hupo.org
EuPA
www.eupa.org
SEProt
www2.cbm.uam.es/seprot

Bioinformatics course: MS bioinformatics analysis for proteomics
Córdoba, 21st-23rd January, 2009


Final agenda (pdf)
 
Final program (pdf)
 
Presentations

  Protein Databases

      Proteomics database contents (pdf)
      Practical session (doc)
      Practicals from EuPA (zip)
     
     
  Protein Identification

      Mass Spectrometry Introduction (pdf)
      Peptide fragmentation (pdf)
      Peptide Mass Fingerprint (pdf)
      MASCOT (rar)
      Spectra (pdf)
      Spectra for de novo sequencing (pdf)
      De novo practical session (ppt)
      GPM Introduction (ppt)
      Mascot (pdf)
      Ejemplos Mascot (xls)
      Unifica_Dtas.bat (rar)
      Merge dtas to single mgf (zip)
    dtas_300.zip
    merge.mgf
     
  Data Validation

      Basic Statistical concepts (pdf)
      The probability ratio (pdf)
      Scoring in database search engines (pdf)
     

Trans Proteomics Pipeline Practical Session (ppt)

     
     
  Data Integration

      Standards in proteomics (ppt)
      Annotations (pdf)
      Repositories (pdf)
      Data(rar)
     
     
  Quantitation

      Quantitation methods introduction (pdf)
      Quantitation tools and statistics (pdf)
      QuiXoT.per (link)
       
20090123 Curso Cordoba
@2009 ProteoRed. All rights reserved. Credits